Microbiological Common Language (MCL): a standard for electronic information exchange in the Microbial Commons
Identifieur interne : 001048 ( Main/Exploration ); précédent : 001047; suivant : 001049Microbiological Common Language (MCL): a standard for electronic information exchange in the Microbial Commons
Auteurs : Bert Verslyppe [Belgique] ; Renzo Kottmann [Allemagne] ; Wim De Smet [Belgique] ; Bernard De Baets [Belgique] ; Paul De Vos [Belgique] ; Peter Dawyndt [Belgique]Source :
- Research in microbiology : (Paris) [ 0923-2508 ] ; 2010.
Descripteurs français
English descriptors
Abstract
Although Biological Resource Centers (BRCs) traditionally have open catalogs of their holdings, it is quite cumbersome to access meta-information about microorganisms electronically due to the variety of access methods used by those catalogs. Therefore, we propose Microbiological Common Language (MCL), aimed at standardizing the electronic exchange of meta-information about microorganisms. Its application ranges from representing the online catalog of a single collection to accessing the results of StrainInfo integration and ad hoc use in other contexts. The abstract model of the standard precisely defines the elements of the standard, which enables implementation using a variety of representation technologies. Currently, XML and RDF/XML implementations are readily available. MCL is an open standard, and therefore greatly encourages input from the microbiological community.
Affiliations:
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Ledeganckstraat 35</s1><s2>9000 Ghent</s2><s3>BEL</s3><sZ>5 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="province" nuts="2">Province de Flandre-Orientale</region><settlement type="city">Gand</settlement></placeName></affiliation></author><author><name sortKey="Dawyndt, Peter" sort="Dawyndt, Peter" uniqKey="Dawyndt P" first="Peter" last="Dawyndt">Peter Dawyndt</name><affiliation wicri:level="3"><inist:fA14 i1="02"><s1>Department of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281</s1><s2>9000 Ghent</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="province" nuts="2">Province de Flandre-Orientale</region><settlement type="city">Gand</settlement></placeName></affiliation></author></analytic><series><title level="j" type="main">Research in microbiology : (Paris)</title><title level="j" type="abbreviated">Res. microbiol. : (Paris)</title><idno type="ISSN">0923-2508</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">Research in microbiology : (Paris)</title><title level="j" type="abbreviated">Res. microbiol. : (Paris)</title><idno type="ISSN">0923-2508</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Standards</term><term>Strain</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>Norme</term><term>Souche</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Norme</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Although Biological Resource Centers (BRCs) traditionally have open catalogs of their holdings, it is quite cumbersome to access meta-information about microorganisms electronically due to the variety of access methods used by those catalogs. Therefore, we propose Microbiological Common Language (MCL), aimed at standardizing the electronic exchange of meta-information about microorganisms. Its application ranges from representing the online catalog of a single collection to accessing the results of StrainInfo integration and ad hoc use in other contexts. The abstract model of the standard precisely defines the elements of the standard, which enables implementation using a variety of representation technologies. Currently, XML and RDF/XML implementations are readily available. MCL is an open standard, and therefore greatly encourages input from the microbiological community.</div></front></TEI><affiliations><list><country><li>Allemagne</li><li>Belgique</li></country><region><li>Brême (Land)</li><li>Province de Flandre-Orientale</li></region><settlement><li>Brême</li><li>Gand</li></settlement></list><tree><country name="Belgique"><region name="Province de Flandre-Orientale"><name sortKey="Verslyppe, Bert" sort="Verslyppe, Bert" uniqKey="Verslyppe B" first="Bert" last="Verslyppe">Bert Verslyppe</name></region><name sortKey="Dawyndt, Peter" sort="Dawyndt, Peter" uniqKey="Dawyndt P" first="Peter" last="Dawyndt">Peter Dawyndt</name><name sortKey="De Baets, Bernard" sort="De Baets, Bernard" uniqKey="De Baets B" first="Bernard" last="De Baets">Bernard De Baets</name><name sortKey="De Smet, Wim" sort="De Smet, Wim" uniqKey="De Smet W" first="Wim" last="De Smet">Wim De Smet</name><name sortKey="De Vos, Paul" sort="De Vos, Paul" uniqKey="De Vos P" first="Paul" last="De Vos">Paul De Vos</name><name sortKey="De Vos, Paul" sort="De Vos, Paul" uniqKey="De Vos P" first="Paul" last="De Vos">Paul De Vos</name><name sortKey="Verslyppe, Bert" sort="Verslyppe, Bert" uniqKey="Verslyppe B" first="Bert" last="Verslyppe">Bert Verslyppe</name></country><country name="Allemagne"><region name="Brême (Land)"><name sortKey="Kottmann, Renzo" sort="Kottmann, Renzo" uniqKey="Kottmann R" first="Renzo" last="Kottmann">Renzo Kottmann</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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